Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0786 | Not Available | Negative | 777763 - 778536 | 29417.2 |
| apag protein | A33Q_0787 | Not Available | Negative | 778538 - 778924 | 14375.2 |
| uracil-dna glycosylase, family 1 | A33Q_0788 | Not Available | Positive | 779000 - 779662 | 25251.2 |
| signal peptidase i | A33Q_0789 | Not Available | Negative | 779802 - 780878 | 41517.4 |
| dihydrodipicolinate reductase | A33Q_0790 | Not Available | Negative | 780893 - 781615 | 26732.8 |
| hypothetical protein | A33Q_0791 | Not Available | Negative | 781618 - 782187 | 21652.2 |
| chromosome (plasmid) partitioning protein parb | A33Q_0792 | Not Available | Negative | 782239 - 783156 | 34332.5 |
| chromosome (plasmid) partitioning protein para | A33Q_0793 | Not Available | Negative | 783162 - 783947 | 28368.7 |
| hypothetical protein | A33Q_0794 | Not Available | Negative | 783957 - 784640 | 24708.4 |
| inner membrane protein translocase component yidc, long form | A33Q_0795 | Not Available | Negative | 784795 - 786603 | 69053.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
