Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0068 | Not Available | Negative | 77051 - 79780 | 103619.0 |
| malate dehydrogenase | A33Q_0069 | Not Available | Negative | 79878 - 80816 | 33709.1 |
| cyclic nucleotide binding protein | A33Q_0070 | Not Available | Negative | 80966 - 81502 | 20982.1 |
| trna(ile)-lysidine synthetase | A33Q_0071 | Not Available | Negative | 81506 - 82822 | 51073.6 |
| hypothetical protein | A33Q_0072 | Not Available | Positive | 82871 - 84550 | 65104.9 |
| hypothetical protein | A33Q_0073 | Not Available | Positive | 84680 - 85387 | 26571.2 |
| lipoprotein, putative | A33Q_0074 | Not Available | Positive | 85423 - 86391 | 37777.9 |
| hypothetical protein | A33Q_0075 | Not Available | Positive | 86417 - 86731 | 12272.4 |
| phosphopantothenoylcysteine decarboxylase | A33Q_0076 | Not Available | Positive | 86734 - 87942 | 43585.7 |
| hypothetical protein | A33Q_0077 | Not Available | Positive | 88021 - 88884 | 33242.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
