Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0727 | Not Available | Negative | 722408 - 722962 | 21048.1 |
| hypothetical protein | A33Q_0728 | Not Available | Negative | 723296 - 723745 | 16689.9 |
| hypothetical protein | A33Q_0729 | Not Available | Negative | 723816 - 724400 | 21611.6 |
| atpase | A33Q_0730 | Not Available | Negative | 724568 - 726343 | 67095.5 |
| trna pseudouridine synthase a | A33Q_0731 | Not Available | Negative | 726356 - 727108 | 28745.4 |
| hypothetical protein | A33Q_0732 | Not Available | Positive | 727215 - 727697 | 17970.5 |
| cystathionine gamma-lyase | A33Q_0733 | Not Available | Positive | 727782 - 728885 | 39900.9 |
| mg(2+) chelatase family protein | A33Q_0734 | Not Available | Negative | 729126 - 730664 | 56244.3 |
| hypothetical protein | A33Q_0735 | Not Available | Negative | 730740 - 731105 | 13866.3 |
| lipid a export atp-binding/permease protein msba | A33Q_0736 | Not Available | Negative | 731142 - 732974 | 68521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
