Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0716 | Not Available | Negative | 711468 - 712112 | 25096.5 |
| putative dna-binding protein | A33Q_0717 | Not Available | Negative | 712168 - 712452 | 11049.3 |
| putative bacteriocin/lantibiotic abc transporter, atp-binding protein | A33Q_0718 | Not Available | Negative | 712659 - 714809 | 80201.9 |
| putative protein secretion protein, hlyd family | A33Q_0719 | Not Available | Negative | 714821 - 715996 | 44141.4 |
| heat shock protein 60 family co-chaperone groes | A33Q_0721 | Not Available | Negative | 716341 - 716715 | 14211.2 |
| chaperone protein dnak | A33Q_0722 | Not Available | Negative | 716983 - 718911 | 68961.0 |
| hypothetical protein | A33Q_0723 | Not Available | Positive | 719115 - 719300 | 7257.21 |
| flavodoxin reductases (ferredoxin-nadph reductases) family 1 | A33Q_0724 | Not Available | Positive | 719361 - 720161 | 30378.7 |
| hypothetical protein | A33Q_0725 | Not Available | Negative | 720233 - 720991 | 27714.7 |
| uroporphyrinogen iii decarboxylase | A33Q_0726 | Not Available | Negative | 721245 - 722270 | 38058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
