Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | A33Q_0686 | Not Available | Positive | 685589 - 686797 | 45536.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | A33Q_0687 | Not Available | Positive | 686802 - 688487 | 63532.2 |
| permease of the major facilitator superfamily | A33Q_0688 | Not Available | Negative | 688484 - 689788 | 47113.4 |
| hypothetical protein | A33Q_0689 | Not Available | Negative | 689867 - 690718 | 31813.7 |
| pin domain protein | A33Q_0690 | Not Available | Negative | 691315 - 691701 | 14607.9 |
| hypothetical protein | A33Q_0691 | Not Available | Negative | 691698 - 691904 | 7668.39 |
| als operon regulatory protein alsr, putative | A33Q_0692 | Not Available | Negative | 692251 - 693132 | 33409.9 |
| hypothetical protein | A33Q_0693 | Not Available | Negative | 693259 - 693636 | 14031.6 |
| hypothetical protein | A33Q_0694 | Not Available | Negative | 693994 - 694299 | 11212.3 |
| histidine ammonia-lyase | A33Q_0695 | Not Available | Positive | 694303 - 695616 | 47724.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
