Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, permease component | A33Q_0646 | Not Available | Negative | 644237 - 645208 | 35796.9 |
| methionine abc transporter atp-binding protein | A33Q_0647 | Not Available | Negative | 645208 - 645981 | 28636.9 |
| abc transporter permease protein | A33Q_0648 | Not Available | Negative | 645962 - 646759 | 28798.7 |
| two-component response regulator | A33Q_0649 | Not Available | Negative | 646777 - 647145 | 14275.5 |
| putative integral membrane protein | A33Q_0650 | Not Available | Positive | 647665 - 649041 | 51895.4 |
| duf1432 domain-containing protein | A33Q_0651 | Not Available | Negative | 649097 - 650116 | 36002.7 |
| hypothetical protein | A33Q_0652 | Not Available | Negative | 650120 - 650581 | 16850.0 |
| prolyl-trna synthetase, bacterial type | A33Q_0653 | Not Available | Negative | 650672 - 652153 | 56450.3 |
| prolyl-trna synthetase | A33Q_0654 | Not Available | Positive | 652282 - 653712 | 50329.0 |
| putative hemin receptor | A33Q_0655 | Not Available | Positive | 653841 - 655316 | 54761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
