Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane protein, probably involved in in nutrient binding protein | A33Q_0636 | Not Available | Negative | 628458 - 629894 | 53876.1 |
| tonb-dependent receptor | A33Q_0637 | Not Available | Negative | 629932 - 633012 | 111374.0 |
| hypothetical protein | A33Q_0638 | Not Available | Positive | 633263 - 636145 | 110919.0 |
| hypothetical protein | A33Q_0639 | Not Available | Negative | 636223 - 638379 | 82363.7 |
| hypothetical protein | A33Q_0640 | Not Available | Positive | 638384 - 638497 | 4265.23 |
| ecsc protein | A33Q_0641 | Not Available | Negative | 638753 - 639502 | 28489.7 |
| hypothetical protein | A33Q_0642 | Not Available | Negative | 639543 - 639788 | 9613.51 |
| hypothetical protein | A33Q_0643 | Not Available | Negative | 640037 - 640153 | 4473.55 |
| aconitate hydratase | A33Q_0644 | Not Available | Negative | 640243 - 643017 | 102405.0 |
| endonuclease/exonuclease/phosphatase | A33Q_0645 | Not Available | Positive | 643461 - 644192 | 28256.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
