Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 615245 - 615329 | Not Available |
| allene oxide synthase-lipoxygenase protein | A33Q_0627 | Not Available | Negative | 615555 - 616553 | 38816.1 |
| hypothetical protein | A33Q_0628 | Not Available | Negative | 616698 - 618887 | 85494.6 |
| adenylate cyclase | A33Q_0629 | Not Available | Negative | 618916 - 624018 | 193224.0 |
| hypothetical protein | A33Q_0630 | Not Available | Positive | 624413 - 624940 | 19220.0 |
| hypothetical protein | A33Q_0631 | Not Available | Negative | 625025 - 625234 | 7543.56 |
| hypothetical protein | A33Q_0632 | Not Available | Negative | 625521 - 625742 | 8752.59 |
| hypothetical protein | A33Q_0633 | Not Available | Positive | 625723 - 625845 | 4508.47 |
| endo-1,4-beta-xylanase a precursor | A33Q_0634 | Not Available | Negative | 625842 - 626972 | 42117.2 |
| hypothetical protein | A33Q_0635 | Not Available | Negative | 626975 - 628441 | 53496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
