Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine related transporter, nagx | A33Q_0048 | Not Available | Positive | 56418 - 57563 | 43052.1 |
| hypothetical protein | A33Q_0049 | Not Available | Negative | 57595 - 58158 | 21181.2 |
| hypothetical protein | A33Q_0050 | Not Available | Negative | 58230 - 58688 | 17959.0 |
| tonb-dependent receptor | A33Q_0051 | Not Available | Negative | 58843 - 61284 | 90082.6 |
| hypothetical protein | A33Q_0052 | Not Available | Negative | 61737 - 61895 | 5645.56 |
| response regulatory protein | A33Q_0053 | Not Available | Positive | 61920 - 62474 | 20977.2 |
| sigma-54 dependent transcriptional regulator/response regulator | A33Q_0054 | Not Available | Positive | 62647 - 63078 | 16461.9 |
| hypothetical protein | A33Q_0055 | Not Available | Negative | 63095 - 63214 | 3966.01 |
| putative acyl protein synthase/acyl-coa reductase-like protein | A33Q_0056 | Not Available | Negative | 63269 - 64282 | 38931.5 |
| hypothetical protein | A33Q_0057 | Not Available | Positive | 64337 - 65017 | 25971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
