Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | A33Q_0557 | Not Available | Positive | 557113 - 558513 | 50701.1 |
| 3-isopropylmalate dehydratase small subunit | A33Q_0558 | Not Available | Positive | 558531 - 559121 | 22177.9 |
| (r)-citramalate synthase | A33Q_0559 | Not Available | Positive | 559170 - 560798 | 60862.6 |
| 3-isopropylmalate dehydrogenase | A33Q_0560 | Not Available | Positive | 560767 - 561828 | 38694.4 |
| trna pseudouridine synthase a | A33Q_0561 | Not Available | Positive | 561873 - 562712 | 31776.2 |
| putative prenyltransferase | A33Q_0562 | Not Available | Negative | 562830 - 563702 | 33108.6 |
| beta-glucanase precursor | A33Q_0563 | Not Available | Negative | 563788 - 564660 | 33423.9 |
| homogentisate 1,2-dioxygenase | A33Q_0564 | Not Available | Positive | 564794 - 565957 | 44212.7 |
| alkaline phosphatase | A33Q_0565 | Not Available | Negative | 566113 - 567750 | 61425.7 |
| xaa-pro aminopeptidase | A33Q_0566 | Not Available | Positive | 567907 - 569310 | 52243.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
