Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | A33Q_0537 | Not Available | Positive | 538158 - 538751 | 23239.2 |
| rna polymerase sigma factor rpoe | A33Q_0538 | Not Available | Positive | 538829 - 539101 | 10134.2 |
| guanylate kinase | A33Q_0539 | Not Available | Positive | 539106 - 539678 | 21751.7 |
| nicotinate-nucleotide adenylyltransferase | A33Q_0540 | Not Available | Positive | 539692 - 540258 | 22053.7 |
| hypothetical protein | A33Q_0541 | Not Available | Negative | 540381 - 541508 | 43139.3 |
| hypothetical protein | A33Q_0542 | Not Available | Negative | 541632 - 541754 | 4511.61 |
| rna polymerase sigma factor sigw | A33Q_0543 | Not Available | Negative | 542198 - 542809 | 23876.8 |
| n-acetylglucosaminyltransferase | A33Q_0544 | Not Available | Negative | 542800 - 543936 | 43587.5 |
| pp_00534 | A33Q_0545 | Not Available | Positive | 544072 - 545202 | Not Available |
| membrane protein, putative | A33Q_0546 | Not Available | Positive | 545205 - 546278 | 40802.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
