Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0527 | Not Available | Negative | 526587 - 527231 | 24931.9 |
| hypothetical protein | A33Q_0528 | Not Available | Negative | 527318 - 527980 | 25218.6 |
| dinb family protein | A33Q_0529 | Not Available | Negative | 527977 - 528420 | 17328.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | A33Q_0530 | Not Available | Negative | 528431 - 529183 | 26831.1 |
| l-arabonate dehydratase | A33Q_0531 | Not Available | Negative | 529194 - 530909 | 62144.4 |
| hypothetical protein | A33Q_0532 | Not Available | Positive | 531542 - 532666 | 41973.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | A33Q_0533 | Not Available | Negative | 532768 - 534075 | 47986.1 |
| hypothetical protein | A33Q_0534 | Not Available | Negative | 534076 - 534765 | 27132.2 |
| atp-dependent dna helicase uvrd/pcra | A33Q_0535 | Not Available | Negative | 534798 - 537053 | 85893.6 |
| lipid a biosynthesis lauroyl acyltransferase | A33Q_0536 | Not Available | Negative | 537191 - 538039 | 33874.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
