Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase beta subunit | A33Q_0487 | Not Available | Negative | 484537 - 488412 | 144789.0 |
| lsu ribosomal protein l7/l12 (p1/p2) | A33Q_0488 | Not Available | Negative | 488572 - 488955 | 12950.6 |
| lsu ribosomal protein l10p (p0) | A33Q_0489 | Not Available | Negative | 489007 - 489543 | 19838.9 |
| lsu ribosomal protein l1p (l10ae) | A33Q_0490 | Not Available | Negative | 489546 - 490244 | 25080.5 |
| lsu ribosomal protein l11p (l12e) | A33Q_0491 | Not Available | Negative | 490256 - 490699 | 15784.4 |
| transcription antitermination protein nusg | A33Q_0492 | Not Available | Negative | 490703 - 491260 | 21027.3 |
| putative preprotein translocase sece subunit | A33Q_0493 | Not Available | Negative | 491279 - 491467 | 7176.89 |
| Trna-trp | Not Available | Not Available | Positive | 491482 - 491555 | Not Available |
| translation elongation factor tu | A33Q_0494 | Not Available | Negative | 491673 - 492779 | 40195.5 |
| Trna-thr | Not Available | Not Available | Positive | 492920 - 492991 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
