Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l2p (l8e) | A33Q_0477 | Not Available | Negative | 473630 - 474454 | 29437.1 |
| lsu ribosomal protein l23p (l23ae) | A33Q_0478 | Not Available | Negative | 474468 - 474710 | 9111.15 |
| lsu ribosomal protein l4p (l1e) | A33Q_0479 | Not Available | Negative | 474759 - 475388 | 23228.1 |
| lsu ribosomal protein l3p (l3e) | A33Q_0480 | Not Available | Negative | 475393 - 475926 | 19406.5 |
| ssu ribosomal protein s10p (s20e) | A33Q_0481 | Not Available | Negative | 476280 - 476585 | 11357.0 |
| translation elongation factor tu | A33Q_0482 | Not Available | Negative | 476599 - 478719 | 78176.5 |
| ssu ribosomal protein s7p (s5e) | A33Q_0483 | Not Available | Negative | 478727 - 479194 | 17681.8 |
| ssu ribosomal protein s12p (s23e) | A33Q_0484 | Not Available | Negative | 479217 - 479462 | 8928.99 |
| hypothetical protein | A33Q_0485 | Not Available | Negative | 479783 - 480112 | 11856.1 |
| dna-directed rna polymerase beta' subunit | A33Q_0486 | Not Available | Negative | 480179 - 484489 | 160186.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
