Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0447 | Not Available | Positive | 454168 - 454875 | 26356.3 |
| hypothetical protein | A33Q_0448 | Not Available | Positive | 455067 - 455795 | 27254.1 |
| tolb protein precursor | A33Q_0449 | Not Available | Negative | 455811 - 459101 | 124061.0 |
| enolase | A33Q_0450 | Not Available | Negative | 459161 - 460438 | 45682.4 |
| carbamoyl-phosphate synthase small chain | A33Q_0451 | Not Available | Negative | 460461 - 461558 | 40183.9 |
| lsu ribosomal protein l17p | A33Q_0452 | Not Available | Negative | 461686 - 462144 | 16902.2 |
| dna-directed rna polymerase alpha subunit | A33Q_0453 | Not Available | Negative | 462219 - 463208 | 36919.8 |
| ssu ribosomal protein s4p (s9e) | A33Q_0454 | Not Available | Negative | 463240 - 463842 | 22701.4 |
| ssu ribosomal protein s11p (s14e) | A33Q_0455 | Not Available | Negative | 463862 - 464260 | 14269.4 |
| ssu ribosomal protein s13p (s18e) | A33Q_0456 | Not Available | Negative | 464276 - 464653 | 14015.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
