Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | A33Q_0417 | Not Available | Negative | 424068 - 424526 | 17203.7 |
| multiple antibiotic resistance protein marc | A33Q_0418 | Not Available | Negative | 424526 - 425113 | 20761.5 |
| phosphoserine aminotransferase | A33Q_0419 | Not Available | Negative | 425115 - 426170 | 39686.6 |
| 3-dehydroquinate dehydratase ii | A33Q_0420 | Not Available | Negative | 426170 - 426595 | 15750.0 |
| hypothetical protein | A33Q_0421 | Not Available | Positive | 426668 - 426961 | 11581.6 |
| site-specific recombinase | A33Q_0422 | Not Available | Positive | 427058 - 427873 | 31369.1 |
| hypothetical protein | A33Q_0423 | Not Available | Positive | 427964 - 428479 | 19460.6 |
| dihydroorotate dehydrogenase | A33Q_0424 | Not Available | Positive | 428567 - 429616 | 38696.1 |
| cell division protein ftsk | A33Q_0425 | Not Available | Positive | 429671 - 432151 | 92017.8 |
| gliding motility-related protein | A33Q_0426 | Not Available | Positive | 432194 - 432847 | 24566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
