Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | A33Q_0407 | Not Available | Positive | 412965 - 413864 | 33930.5 |
| membrane protein, putative | A33Q_0408 | Not Available | Positive | 413857 - 415167 | 48866.2 |
| hypothetical protein | A33Q_0409 | Not Available | Negative | 415197 - 415637 | 17431.2 |
| hypothetical protein | A33Q_0410 | Not Available | Negative | 415719 - 416360 | 24235.3 |
| cytidine deaminase | A33Q_0411 | Not Available | Negative | 416360 - 416848 | 18160.9 |
| saccharopine dehydrogenase | A33Q_0412 | Not Available | Positive | 416976 - 418310 | 50552.6 |
| hypothetical protein | A33Q_0413 | Not Available | Negative | 418313 - 419371 | 39545.8 |
| tonb-dependent receptor | A33Q_0414 | Not Available | Negative | 419377 - 421779 | 89383.7 |
| hypothetical protein | A33Q_0415 | Not Available | Negative | 421790 - 423244 | 54255.6 |
| trna (adenine37-n(6))-methyltransferase trmn6 | A33Q_0416 | Not Available | Negative | 423337 - 424053 | 27484.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
