Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yrbg, predicted calcium/sodium:proton antiporter | A33Q_0397 | Not Available | Negative | 403805 - 404722 | 32749.0 |
| uracil phosphoribosyltransferase | A33Q_0398 | Not Available | Negative | 404727 - 405383 | 24322.5 |
| outer membrane protein a precursor | A33Q_0399 | Not Available | Negative | 405499 - 406794 | 46589.2 |
| cellulase m | A33Q_0400 | Not Available | Positive | 406988 - 407905 | 34571.4 |
| hypoxanthine-guanine phosphoribosyltransferase | A33Q_0401 | Not Available | Positive | 407963 - 408520 | 21044.6 |
| adenylate kinase | A33Q_0402 | Not Available | Positive | 408538 - 409110 | 20945.2 |
| gtp-binding protein obg | A33Q_0403 | Not Available | Positive | 409194 - 410189 | 36032.3 |
| heat shock protein grpe | A33Q_0404 | Not Available | Positive | 410262 - 410843 | 22046.8 |
| chaperone protein dnaj | A33Q_0405 | Not Available | Positive | 410853 - 411959 | 40146.1 |
| hypothetical protein | A33Q_0406 | Not Available | Positive | 412037 - 412924 | 33000.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
