Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase protein | A33Q_0377 | Not Available | Negative | 385717 - 386025 | 11828.6 |
| glycerol uptake facilitator protein | A33Q_0378 | Not Available | Negative | 386492 - 387238 | 25623.6 |
| glycerol kinase | A33Q_0379 | Not Available | Negative | 387238 - 388728 | 54732.8 |
| hypothetical protein | A33Q_0380 | Not Available | Positive | 388743 - 388859 | 4530.61 |
| glycerol-3-phosphate dehydrogenase | A33Q_0381 | Not Available | Negative | 388851 - 390413 | 57976.3 |
| transcriptional repressor of aga operon | A33Q_0382 | Not Available | Positive | 390538 - 391299 | 27590.9 |
| hypothetical protein | A33Q_0383 | Not Available | Negative | 391388 - 391783 | 14741.2 |
| trna pseudouridine synthase c, group truc1 | A33Q_0384 | Not Available | Negative | 391964 - 392698 | 28280.4 |
| putative ribonuclease | A33Q_0385 | Not Available | Positive | 392857 - 393774 | 34354.9 |
| peptide chain release factor 3 | A33Q_0386 | Not Available | Negative | 393782 - 395362 | 60120.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
