Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na(+)-translocating nadh-quinone reductase subunit d | A33Q_0367 | Not Available | Negative | 376261 - 376944 | 24743.8 |
| na(+)-translocating nadh-quinone reductase subunit c | A33Q_0368 | Not Available | Negative | 376973 - 377695 | 26113.7 |
| na(+)-translocating nadh-quinone reductase subunit b | A33Q_0369 | Not Available | Negative | 377736 - 378950 | 43707.3 |
| na(+)-translocating nadh-quinone reductase subunit a | A33Q_0370 | Not Available | Negative | 378956 - 380320 | 50228.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | A33Q_0371 | Not Available | Negative | 380452 - 381354 | 33978.7 |
| cytidylate kinase | A33Q_0372 | Not Available | Negative | 381356 - 382045 | 25604.7 |
| adenine deaminase | A33Q_0373 | Not Available | Positive | 382197 - 383831 | 59440.1 |
| hypothetical protein | A33Q_0374 | Not Available | Negative | 383828 - 384004 | 7289.92 |
| butyryl-coa dehydrogenase | A33Q_0375 | Not Available | Positive | 384065 - 385207 | 41650.9 |
| aaa+ superfamily protein | A33Q_0376 | Not Available | Negative | 385370 - 385696 | 12840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
