Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0357 | Not Available | Positive | 369568 - 369690 | 4698.84 |
| methylated-dna--protein-cysteine methyltransferase | A33Q_0358 | Not Available | Negative | 369702 - 370196 | 18423.3 |
| hypothetical protein | A33Q_0359 | Not Available | Negative | 370443 - 371138 | 26555.0 |
| dna polymerase iv | A33Q_0360 | Not Available | Positive | 371315 - 372499 | 44913.4 |
| thioredoxin reductase | A33Q_0361 | Not Available | Positive | 372691 - 373011 | 11465.9 |
| putative secreted glycosyl hydrolase | A33Q_0362 | Not Available | Negative | 373137 - 373763 | 23932.1 |
| putative membrane protein | A33Q_0363 | Not Available | Negative | 373894 - 374484 | 22100.8 |
| hypothetical protein | A33Q_0364 | Not Available | Positive | 374495 - 374623 | 4922.99 |
| hypothetical protein | A33Q_0365 | Not Available | Positive | 374653 - 375579 | 35282.9 |
| na(+)-translocating nadh-quinone reductase subunit e | A33Q_0366 | Not Available | Negative | 375636 - 376202 | 20127.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
