Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0337 | Not Available | Negative | 350274 - 350432 | 5864.18 |
| uracil phosphoribosyltransferase | A33Q_0338 | Not Available | Positive | 350505 - 350894 | 15023.2 |
| aspartate carbamoyltransferase | A33Q_0339 | Not Available | Positive | 350903 - 351826 | 34061.5 |
| atp-dependent hsl protease atp-binding subunit hslu | A33Q_0340 | Not Available | Negative | 352133 - 353539 | 52539.2 |
| hypothetical protein | A33Q_0341 | Not Available | Negative | 353556 - 354401 | 31313.4 |
| hypothetical protein | A33Q_0342 | Not Available | Positive | 354472 - 354600 | 4765.88 |
| atp-dependent protease la type i | A33Q_0343 | Not Available | Negative | 354608 - 357061 | 91856.6 |
| hypothetical protein | A33Q_0344 | Not Available | Negative | 357306 - 357641 | 12834.1 |
| membrane-associated zinc metalloprotease | A33Q_0345 | Not Available | Negative | 357754 - 359067 | 47882.3 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | A33Q_0346 | Not Available | Negative | 359067 - 360272 | 44445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
