Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0327 | Not Available | Negative | 339331 - 339885 | 21851.4 |
| dna polymerase iii epsilon subunit | A33Q_0328 | Not Available | Negative | 340075 - 343023 | 113847.0 |
| hypothetical protein | A33Q_0329 | Not Available | Positive | 343297 - 343446 | 5672.81 |
| mscs mechanosensitive ion channel | A33Q_0330 | Not Available | Positive | 343482 - 344375 | 34733.4 |
| hypothetical protein | A33Q_0331 | Not Available | Negative | 344466 - 345185 | 27196.4 |
| hypothetical protein | A33Q_0332 | Not Available | Negative | 345460 - 346095 | 24158.7 |
| hypothetical protein | A33Q_0333 | Not Available | Negative | 346105 - 346392 | 10548.7 |
| dna polymerase x family | A33Q_0334 | Not Available | Negative | 346395 - 348056 | 62554.9 |
| rna-binding protein | A33Q_0335 | Not Available | Positive | 348210 - 348617 | 15580.5 |
| hypothetical protein | A33Q_0336 | Not Available | Positive | 348677 - 350242 | 62149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
