Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multi-sensor hybrid histidine kinase | A33Q_3313 | Not Available | Positive | 3484724 - 3487246 | 96471.9 |
| response regulator of zinc sigma-54-dependent two-component system | A33Q_3314 | Not Available | Negative | 3487247 - 3487774 | 20668.7 |
| hypothetical protein | A33Q_3316 | Not Available | Negative | 3489110 - 3489400 | 11105.3 |
| hypothetical protein | A33Q_3317 | Not Available | Negative | 3489397 - 3489558 | 6258.77 |
| hypothetical protein | A33Q_3318 | Not Available | Positive | 3489618 - 3489785 | 6375.84 |
| hypothetical protein | A33Q_3319 | Not Available | Negative | 3489873 - 3490163 | 11105.3 |
| hypothetical protein | A33Q_3320 | Not Available | Negative | 3490160 - 3490528 | 14537.9 |
| putative dna-binding protein in cluster with type i restriction-modification system | A33Q_3321 | Not Available | Negative | 3490740 - 3491750 | 38805.4 |
| hypothetical protein | A33Q_3322 | Not Available | Negative | 3491786 - 3492118 | 12437.2 |
| dtdp-glucose 4,6-dehydratase | A33Q_3323 | Not Available | Negative | 3492439 - 3493485 | 39806.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
