Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | A33Q_3303 | Not Available | Negative | 3471947 - 3472531 | 22012.0 |
| arginyl-trna synthetase | A33Q_3304 | Not Available | Negative | 3472624 - 3474414 | 67861.0 |
| arginase | A33Q_3305 | Not Available | Negative | 3474448 - 3475398 | 35322.2 |
| aspartate aminotransferase | A33Q_3306 | Not Available | Positive | 3475611 - 3476756 | 43208.6 |
| glycogen debranching enzyme | A33Q_3307 | Not Available | Negative | 3476761 - 3478863 | 79521.0 |
| hypothetical protein | A33Q_3308 | Not Available | Positive | 3479119 - 3479241 | 4793.0 |
| putative phosphomannomutase | A33Q_3309 | Not Available | Positive | 3479411 - 3480451 | 39303.3 |
| sulfate permease | A33Q_3310 | Not Available | Positive | 3480664 - 3482223 | 55796.9 |
| small-conductance mechanosensitive channel | A33Q_3311 | Not Available | Negative | 3482322 - 3483674 | 52259.0 |
| hypothetical protein | A33Q_3312 | Not Available | Positive | 3483902 - 3484390 | 18807.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
