Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_3244 | Not Available | Positive | 3403999 - 3404187 | 7427.89 |
| hypothetical protein | A33Q_3245 | Not Available | Negative | 3404807 - 3404950 | 5564.83 |
| transcriptional repressor of aga operon | A33Q_3246 | Not Available | Negative | 3405255 - 3406022 | 28057.1 |
| sodium-solute symporter, putative | A33Q_3247 | Not Available | Positive | 3406622 - 3408277 | 59492.7 |
| putative membrane protein | A33Q_3248 | Not Available | Positive | 3408366 - 3409760 | 50440.2 |
| hypothetical protein | A33Q_3249 | Not Available | Positive | 3409750 - 3410694 | 36404.8 |
| hypothetical protein | A33Q_3250 | Not Available | Positive | 3410704 - 3411822 | 43083.2 |
| tonb-dependent receptor | A33Q_3251 | Not Available | Positive | 3412528 - 3415623 | 113640.0 |
| putative outer membrane protein, probably involved in in nutrient binding protein | A33Q_3252 | Not Available | Positive | 3415639 - 3417309 | 63362.1 |
| endonuclease/exonuclease/phosphatase family protein | A33Q_3253 | Not Available | Positive | 3417661 - 3418458 | 30472.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
