Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bata | A33Q_3214 | Not Available | Positive | 3372950 - 3373996 | 39507.8 |
| alkane-1 monooxygenase | A33Q_3215 | Not Available | Negative | 3373985 - 3375073 | 41833.4 |
| hypothetical protein | A33Q_3216 | Not Available | Negative | 3375115 - 3375780 | 25031.9 |
| cystathionine beta-synthase | A33Q_3217 | Not Available | Negative | 3375901 - 3377268 | 50344.3 |
| rok family transcriptional repressor | A33Q_3218 | Not Available | Negative | 3377358 - 3378236 | 32040.7 |
| glucosamine-6-phosphate deaminase | A33Q_3219 | Not Available | Negative | 3378316 - 3380643 | 88615.0 |
| putative signal-transduction protein | A33Q_3220 | Not Available | Negative | 3380900 - 3382330 | 55194.2 |
| 6-phosphogluconate dehydrogenase, decarboxylating | A33Q_3221 | Not Available | Positive | 3382409 - 3384352 | 72394.3 |
| amidohydrolase family enzyme | A33Q_3222 | Not Available | Positive | 3384361 - 3385728 | 50971.7 |
| cold shock protein cspa | A33Q_3223 | Not Available | Negative | 3385779 - 3385970 | 6878.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
