Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | A33Q_3194 | Not Available | Negative | 3353971 - 3354510 | 20522.7 |
| hypothetical protein | A33Q_3195 | Not Available | Positive | 3354542 - 3354655 | 4244.25 |
| two-component sensor histidine kinase | A33Q_3196 | Not Available | Negative | 3354647 - 3356758 | 79460.5 |
| hypothetical protein | A33Q_3197 | Not Available | Negative | 3356737 - 3357462 | 27174.6 |
| putative molybdopterin biosynthesis protein moey | A33Q_3198 | Not Available | Negative | 3357459 - 3358487 | 38965.6 |
| two-component response regulator | A33Q_3199 | Not Available | Positive | 3358760 - 3359233 | 18291.9 |
| alanine dehydrogenase | A33Q_3200 | Not Available | Negative | 3359230 - 3360432 | 43457.0 |
| tsae protein, required for threonylcarbamoyladenosine t(6)a37 formation in trna | A33Q_3201 | Not Available | Negative | 3360425 - 3360781 | 13817.3 |
| response regulator | A33Q_3202 | Not Available | Negative | 3360870 - 3362432 | 60504.5 |
| deoxyguanosinetriphosphate triphosphohydrolase | A33Q_3203 | Not Available | Positive | 3362484 - 3363719 | 48041.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
