Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3345223 - 3345308 | Not Available |
| methylenetetrahydrofolate dehydrogenase (nadp+) | A33Q_3185 | Not Available | Negative | 3345408 - 3346295 | 31547.4 |
| hypothetical protein | A33Q_3186 | Not Available | Negative | 3346676 - 3347029 | 13521.3 |
| translation elongation factor lepa | A33Q_3187 | Not Available | Negative | 3347185 - 3349029 | 69024.2 |
| hypothetical protein | A33Q_3188 | Not Available | Negative | 3349093 - 3349248 | 6351.85 |
| hypothetical protein | A33Q_3189 | Not Available | Positive | 3349240 - 3349728 | 18987.4 |
| superfamily i dna/rna helicase | A33Q_3190 | Not Available | Negative | 3349729 - 3351657 | 73376.2 |
| acyl carrier protein phosphodiesterase | A33Q_3191 | Not Available | Positive | 3351734 - 3352318 | 23143.6 |
| hypothetical protein | A33Q_3192 | Not Available | Positive | 3352315 - 3352779 | 17814.4 |
| outer membrane protein | A33Q_3193 | Not Available | Negative | 3352859 - 3353908 | 40515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
