Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane protein probably involved in in nutrient binding protein | A33Q_0307 | Not Available | Negative | 313731 - 315272 | 56403.0 |
| tonb-dependent receptor | A33Q_0308 | Not Available | Negative | 315285 - 318356 | 111257.0 |
| lipid-a-disaccharide synthase | A33Q_0309 | Not Available | Negative | 318908 - 320011 | 41601.5 |
| 6-pyruvoyl tetrahydrobiopterin synthase | A33Q_0310 | Not Available | Negative | 320050 - 320469 | 16039.2 |
| hypothetical protein | A33Q_0311 | Not Available | Positive | 320428 - 320550 | 4727.83 |
| outer membrane lipoprotein omp16 precursor | A33Q_0312 | Not Available | Negative | 320636 - 322564 | 73580.4 |
| queuosine biosynthesis quee radical sam | A33Q_0313 | Not Available | Negative | 322567 - 323193 | 23536.4 |
| inosose dehydratase | A33Q_0314 | Not Available | Negative | 323303 - 324145 | 31056.3 |
| hypothetical protein | A33Q_0315 | Not Available | Positive | 324144 - 324284 | 5362.86 |
| glyoxalase family protein | A33Q_0316 | Not Available | Positive | 324329 - 324706 | 14131.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
