Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-zinc-cadmium resistance protein czca | A33Q_3155 | Not Available | Negative | 3311517 - 3315395 | 144015.0 |
| hypothetical protein | A33Q_3156 | Not Available | Negative | 3315649 - 3315960 | 11836.0 |
| hypothetical protein | A33Q_3157 | Not Available | Negative | 3316098 - 3316703 | 23318.4 |
| hypothetical protein | A33Q_3158 | Not Available | Negative | 3317158 - 3317337 | 6475.64 |
| lead, cadmium, zinc and mercury transporting atpase | A33Q_3159 | Not Available | Negative | 3317605 - 3319839 | 80650.2 |
| putative regulatory protein | A33Q_3160 | Not Available | Negative | 3319924 - 3320490 | 21646.3 |
| transcriptional regulator/antitoxin, maze | A33Q_3161 | Not Available | Positive | 3320858 - 3321097 | 9240.05 |
| pemk family protein | A33Q_3162 | Not Available | Positive | 3321094 - 3321417 | 12213.1 |
| atpase | A33Q_3163 | Not Available | Positive | 3321842 - 3323035 | 46373.1 |
| hypothetical protein | A33Q_3164 | Not Available | Negative | 3323066 - 3323662 | 22587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
