Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-sorbosone dehydrogenase | A33Q_3115 | Not Available | Positive | 3260295 - 3261425 | 42097.7 |
| putative oxidoreductase | A33Q_3116 | Not Available | Positive | 3261583 - 3262839 | 48120.9 |
| ubiquinone biosynthesis monooxygenase ubib | A33Q_3117 | Not Available | Negative | 3262986 - 3264326 | 51486.4 |
| hypothetical protein | A33Q_3118 | Not Available | Negative | 3264336 - 3265001 | 26053.0 |
| atp-dependent protease hslv | A33Q_3119 | Not Available | Negative | 3265225 - 3265767 | 19259.3 |
| dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex | A33Q_3120 | Not Available | Negative | 3266009 - 3267679 | 59838.9 |
| hydrolase | A33Q_3121 | Not Available | Positive | 3267823 - 3268782 | 37031.2 |
| yoqw | A33Q_3122 | Not Available | Positive | 3268805 - 3269503 | 26795.9 |
| metallo-beta-lactamase protein | A33Q_3123 | Not Available | Positive | 3269503 - 3270402 | 34101.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase, kasiii | A33Q_3124 | Not Available | Positive | 3270502 - 3271500 | 36163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
