Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase | A33Q_3105 | Not Available | Negative | 3247790 - 3250051 | 81118.4 |
| short chain fatty acid transporter | A33Q_3106 | Not Available | Negative | 3250176 - 3251474 | 47487.0 |
| hypothetical protein | A33Q_3107 | Not Available | Negative | 3251591 - 3252604 | 38574.7 |
| ferredoxin | A33Q_3108 | Not Available | Positive | 3252754 - 3253101 | 12781.7 |
| hypothetical protein | A33Q_3109 | Not Available | Positive | 3253284 - 3253613 | 13280.2 |
| hypothetical protein | A33Q_3110 | Not Available | Positive | 3253918 - 3254814 | 33224.7 |
| gtp-binding and nucleic acid-binding protein ychf | A33Q_3111 | Not Available | Positive | 3254832 - 3255929 | 40399.7 |
| hypothetical protein | A33Q_3112 | Not Available | Positive | 3256032 - 3256910 | 33993.2 |
| hypothetical protein | A33Q_3113 | Not Available | Negative | 3256955 - 3258193 | 48593.4 |
| glutathione-regulated potassium-efflux system atp-binding protein | A33Q_3114 | Not Available | Negative | 3258236 - 3260161 | 73199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
