Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp:cob(i)alamin adenosyltransferase | A33Q_3085 | Not Available | Positive | 3223421 - 3223969 | 20837.2 |
| branched-chain amino acid aminotransferase | A33Q_3086 | Not Available | Positive | 3224113 - 3225180 | 39761.6 |
| hypothetical protein | A33Q_3087 | Not Available | Positive | 3225267 - 3225818 | 20768.4 |
| peptide chain release factor 2 | A33Q_3088 | Not Available | Positive | 3226021 - 3226968 | 35623.3 |
| major facilitator superfamily mfs_1 | A33Q_3089 | Not Available | Positive | 3227140 - 3228246 | 39413.1 |
| yhhn family protein | A33Q_3090 | Not Available | Positive | 3228587 - 3229330 | 28394.3 |
| hypothetical protein | A33Q_3091 | Not Available | Negative | 3229342 - 3230694 | 51487.3 |
| acyl coa thioester hydrolase family protein | A33Q_3092 | Not Available | Negative | 3230710 - 3231264 | 20546.1 |
| multi antimicrobial extrusion protein | A33Q_3093 | Not Available | Negative | 3231306 - 3232679 | 50204.3 |
| adp-ribose pyrophosphatase | A33Q_3094 | Not Available | Negative | 3232712 - 3233251 | 20180.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
