Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0298 | Not Available | Negative | 305316 - 305537 | 8619.19 |
| anti-sigma f factor antagonist (spoiiaa-2) | A33Q_0299 | Not Available | Negative | 305734 - 306078 | 12779.6 |
| ferric uptake regulation protein fur | A33Q_0300 | Not Available | Negative | 306075 - 306542 | 18186.8 |
| gtp pyrophosphokinase, (p)ppgpp synthetase ii | A33Q_0301 | Not Available | Negative | 306613 - 308835 | 84793.9 |
| Trna-leu | Not Available | Not Available | Positive | 308967 - 309048 | Not Available |
| cell division trigger factor | A33Q_0302 | Not Available | Positive | 309158 - 310486 | 50374.5 |
| atp-dependent clp protease proteolytic subunit | A33Q_0303 | Not Available | Positive | 310568 - 311236 | 25022.2 |
| atp-dependent clp protease atp-binding subunit clpx | A33Q_0304 | Not Available | Positive | 311297 - 312469 | 43673.8 |
| hypothetical protein | A33Q_0305 | Not Available | Negative | 312504 - 313115 | 23336.7 |
| hypothetical protein | A33Q_0306 | Not Available | Negative | 313237 - 313716 | 17245.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
