Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_3075 | Not Available | Negative | 3212437 - 3212994 | 21445.1 |
| membrane-bound lytic murein transglycosylase d precursor | A33Q_3076 | Not Available | Negative | 3213126 - 3214322 | 43293.6 |
| putative membrane-bound clpp-class protease associated | A33Q_3077 | Not Available | Positive | 3214491 - 3215849 | 48950.3 |
| hypothetical protein | A33Q_3078 | Not Available | Negative | 3216012 - 3216245 | 8772.11 |
| hypothetical protein | A33Q_3079 | Not Available | Negative | 3216334 - 3218010 | 63491.5 |
| hemoglobin-like protein hbo | A33Q_3080 | Not Available | Positive | 3218212 - 3218589 | 14919.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | A33Q_3081 | Not Available | Positive | 3218586 - 3219326 | 27923.8 |
| aspartyl-trna(asn) amidotransferase subunit c | A33Q_3082 | Not Available | Positive | 3219377 - 3219634 | 9722.4 |
| hypothetical protein | A33Q_3083 | Not Available | Positive | 3219754 - 3222438 | 102162.0 |
| macrolide export atp-binding/permease protein macb | A33Q_3084 | Not Available | Positive | 3222613 - 3223335 | 26543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
