Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein, putative | A33Q_3055 | Not Available | Negative | 3190046 - 3192316 | 84771.6 |
| thymidylate synthase | A33Q_3056 | Not Available | Positive | 3192376 - 3193170 | 30437.4 |
| aminodeoxychorismate lyase | A33Q_3057 | Not Available | Negative | 3193172 - 3193990 | 31159.6 |
| l-serine dehydratase, beta subunit | A33Q_3058 | Not Available | Positive | 3194158 - 3194835 | 24192.3 |
| putative outer membrane transport/efflux protein | A33Q_3059 | Not Available | Positive | 3194837 - 3196180 | 50116.5 |
| macrolide-specific efflux protein maca | A33Q_3060 | Not Available | Positive | 3196190 - 3197494 | 47755.2 |
| hypothetical protein | A33Q_3061 | Not Available | Negative | 3197575 - 3198195 | 23488.6 |
| hypothetical protein | A33Q_3062 | Not Available | Negative | 3198196 - 3198411 | 8587.72 |
| hypothetical protein | A33Q_3063 | Not Available | Positive | 3198612 - 3199442 | 31300.8 |
| acetyltransferase (isoleucine patch superfamily) | A33Q_3064 | Not Available | Positive | 3199496 - 3200086 | 21279.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
