Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coenzyme f420 hydrogenase/dehydrogenase beta subunit domain protein | A33Q_3045 | Not Available | Negative | 3177210 - 3178565 | 51352.9 |
| putative lipopolysaccharide biosynthesis protein | A33Q_3046 | Not Available | Negative | 3178565 - 3179980 | 53594.6 |
| putative polysialic acid transport protein | A33Q_3047 | Not Available | Negative | 3180047 - 3182683 | 98628.9 |
| hypothetical protein | A33Q_3048 | Not Available | Negative | 3182845 - 3183315 | 17773.3 |
| hypothetical protein | A33Q_3049 | Not Available | Negative | 3183507 - 3183662 | 5694.06 |
| hypothetical protein | A33Q_3050 | Not Available | Positive | 3183685 - 3183813 | 4730.88 |
| penicillin amidase | A33Q_3051 | Not Available | Negative | 3183888 - 3186305 | 92722.4 |
| hypothetical protein | A33Q_3052 | Not Available | Negative | 3186436 - 3187011 | 21324.0 |
| xaa-pro aminopeptidase family enzyme | A33Q_3053 | Not Available | Positive | 3187284 - 3188627 | 49227.7 |
| hypothetical protein | A33Q_3054 | Not Available | Positive | 3189075 - 3190052 | 37556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
