Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase | A33Q_3025 | Not Available | Negative | 3151538 - 3152692 | 42187.8 |
| n-acetylneuraminate synthase | A33Q_3026 | Not Available | Negative | 3152711 - 3153709 | 36737.7 |
| asparagine synthetase | A33Q_3027 | Not Available | Negative | 3153706 - 3155589 | 71402.8 |
| hypothetical protein | A33Q_3028 | Not Available | Negative | 3155595 - 3156632 | 39575.3 |
| phospholipid-lipopolysaccharide abc transporter | A33Q_3029 | Not Available | Negative | 3156677 - 3158479 | 67718.0 |
| tyrosine-protein kinase wzc | A33Q_3030 | Not Available | Negative | 3158510 - 3160867 | 89553.8 |
| polysaccharide export outer membrane protein | A33Q_3031 | Not Available | Negative | 3160873 - 3161622 | 27852.4 |
| udp-glucose dehydrogenase | A33Q_3032 | Not Available | Negative | 3161810 - 3163114 | 48150.3 |
| glucose-1-phosphate thymidylyltransferase | A33Q_3033 | Not Available | Negative | 3163383 - 3164255 | 32243.0 |
| udp-glucose dehydrogenase | A33Q_3034 | Not Available | Negative | 3164360 - 3165760 | 51636.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
