Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | A33Q_3005 | Not Available | Negative | 3128994 - 3129941 | 36302.3 |
| hypothetical protein | A33Q_3006 | Not Available | Negative | 3129944 - 3131065 | 42840.4 |
| hypothetical protein | A33Q_3007 | Not Available | Negative | 3131073 - 3132173 | 42594.5 |
| glycosyl transferase, family 8 | A33Q_3008 | Not Available | Negative | 3132170 - 3133054 | 34431.8 |
| asparagine synthetase | A33Q_3009 | Not Available | Negative | 3133102 - 3134970 | 71577.9 |
| glycosyltransferase | A33Q_3010 | Not Available | Negative | 3134972 - 3136021 | 40253.3 |
| udp-glucose 4-epimerase | A33Q_3011 | Not Available | Negative | 3136038 - 3136976 | 35029.2 |
| putative glycosyltransferase | A33Q_3012 | Not Available | Negative | 3136983 - 3138176 | 44627.9 |
| hypothetical protein | A33Q_3013 | Not Available | Negative | 3138214 - 3139260 | 40311.7 |
| putative capk protein, putative | A33Q_3014 | Not Available | Negative | 3139323 - 3140642 | 50254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
