Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0018 | Not Available | Negative | 23290 - 23835 | 21162.8 |
| putative metal-dependent amidohydrolase with the tim-barrel fold protein | A33Q_0019 | Not Available | Positive | 23892 - 25454 | 58559.7 |
| hypothetical protein | A33Q_0020 | Not Available | Negative | 25456 - 26154 | 27350.2 |
| glutamyl-trna reductase | A33Q_0021 | Not Available | Positive | 26361 - 27650 | 48589.0 |
| hypothetical protein | A33Q_0022 | Not Available | Positive | 27720 - 29294 | 59529.8 |
| hypothetical protein | A33Q_0023 | Not Available | Positive | 29330 - 29782 | 17055.7 |
| hypothetical protein | A33Q_0024 | Not Available | Negative | 29795 - 32632 | 109092.0 |
| uvrd/rep helicase | A33Q_0025 | Not Available | Negative | 32625 - 35912 | 127225.0 |
| hypothetical protein | A33Q_0026 | Not Available | Negative | 35971 - 36579 | 22754.4 |
| protein in cluster with ribosomal protein l32p, bacteroidetes/chlorobi subfamily | A33Q_0027 | Not Available | Positive | 36777 - 37337 | 21733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
