Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide oxidoreductase | A33Q_2975 | Not Available | Positive | 3075560 - 3076135 | 21679.3 |
| hypothetical protein | A33Q_2976 | Not Available | Positive | 3076240 - 3076890 | 24805.0 |
| putative large secreted protein | A33Q_2977 | Not Available | Positive | 3076998 - 3079334 | 87805.4 |
| sialic acid-specific 9-o-acetylesterase | A33Q_2978 | Not Available | Negative | 3079452 - 3081380 | 73265.7 |
| hypothetical protein | A33Q_2979 | Not Available | Negative | 3081491 - 3081724 | 8969.49 |
| sugar metabolism cluster protein | A33Q_2980 | Not Available | Negative | 3081780 - 3082586 | 30749.3 |
| hypothetical protein | A33Q_2981 | Not Available | Negative | 3082634 - 3082831 | 6730.58 |
| glycosyl hydrolase, bnr repeat precursor | A33Q_2982 | Not Available | Negative | 3083156 - 3086425 | 121470.0 |
| hypothetical protein | A33Q_2983 | Not Available | Negative | 3086585 - 3087022 | 16662.6 |
| hypothetical protein | A33Q_2984 | Not Available | Negative | 3087142 - 3089898 | 103614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
