Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_2965 | Not Available | Positive | 3066517 - 3067275 | 29294.4 |
| hypothetical protein | A33Q_2966 | Not Available | Negative | 3067259 - 3067717 | 17770.9 |
| ribosomal large subunit pseudouridine synthase f | A33Q_2967 | Not Available | Positive | 3067845 - 3068603 | 28886.4 |
| histidinol-phosphate aminotransferase | A33Q_2968 | Not Available | Positive | 3068745 - 3069914 | 42691.1 |
| hypothetical protein | A33Q_2969 | Not Available | Positive | 3069973 - 3071079 | 40372.9 |
| hypothetical protein | A33Q_2970 | Not Available | Negative | 3071081 - 3071848 | 28975.6 |
| hypothetical protein | A33Q_2971 | Not Available | Negative | 3071861 - 3072115 | 9824.77 |
| hypothetical protein | A33Q_2972 | Not Available | Negative | 3072401 - 3072586 | 7035.65 |
| transcription accessory protein (s1 rna-binding domain) | A33Q_2973 | Not Available | Negative | 3072701 - 3074956 | 83335.2 |
| hypothetical protein | A33Q_2974 | Not Available | Negative | 3075114 - 3075365 | 9204.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
