Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor sui1-related protein | A33Q_2955 | Not Available | Positive | 3057775 - 3058131 | 12959.5 |
| gdsl-like lipase/acylhydrolase, putative | A33Q_2956 | Not Available | Positive | 3058180 - 3058914 | 27791.1 |
| hypothetical protein | A33Q_2957 | Not Available | Positive | 3059090 - 3059671 | 21542.4 |
| lactoylglutathione lyase | A33Q_2958 | Not Available | Positive | 3059841 - 3060233 | 15196.3 |
| atp-dependent rna helicase rhle | A33Q_2959 | Not Available | Positive | 3060389 - 3061585 | 44391.2 |
| lysophospholipase | A33Q_2960 | Not Available | Negative | 3061793 - 3062566 | 29340.1 |
| naphthoate synthase | A33Q_2961 | Not Available | Negative | 3062779 - 3063618 | 30981.0 |
| o-succinylbenzoic acid--coa ligase | A33Q_2962 | Not Available | Positive | 3063697 - 3064773 | 41183.7 |
| hypothetical protein | A33Q_2963 | Not Available | Positive | 3064770 - 3065192 | 15207.2 |
| hypothetical protein | A33Q_2964 | Not Available | Positive | 3065218 - 3066408 | 46262.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
