Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin kinase | A33Q_2945 | Not Available | Positive | 3047260 - 3048192 | 35488.6 |
| succinyl-coa:3-ketoacid-coenzyme a transferase subunit a | A33Q_2946 | Not Available | Positive | 3048211 - 3048909 | 25184.4 |
| succinyl-coa:3-ketoacid-coenzyme a transferase subunit b | A33Q_2947 | Not Available | Positive | 3049368 - 3050027 | 23707.2 |
| thij/pfpi family protein | A33Q_2948 | Not Available | Negative | 3050056 - 3050640 | 21351.1 |
| hypothetical protein | A33Q_2949 | Not Available | Positive | 3050639 - 3050752 | 4406.53 |
| metal transporter, zip family | A33Q_2950 | Not Available | Positive | 3050783 - 3051610 | 29626.4 |
| phosphoribosylformylglycinamidine synthase, synthetase subunit | A33Q_2951 | Not Available | Negative | 3051615 - 3055298 | 134974.0 |
| hypothetical protein | A33Q_2952 | Not Available | Positive | 3055299 - 3055445 | 5418.63 |
| hypothetical protein | A33Q_2953 | Not Available | Negative | 3055479 - 3056711 | 47591.2 |
| universal stress protein family | A33Q_2954 | Not Available | Positive | 3056923 - 3057771 | 31161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
