Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd efflux system, inner membrane transporter cmeb | A33Q_2925 | Not Available | Negative | 3027373 - 3030525 | 114956.0 |
| putative co/zn/cd efflux system membrane fusion protein | A33Q_2926 | Not Available | Negative | 3030538 - 3031713 | 44166.9 |
| hypothetical protein | A33Q_2927 | Not Available | Negative | 3031790 - 3032155 | 14045.0 |
| hypothetical protein | A33Q_2928 | Not Available | Positive | 3032131 - 3032253 | 4651.67 |
| methionyl-trna formyltransferase | A33Q_2929 | Not Available | Positive | 3032273 - 3033208 | 35167.4 |
| hypothetical protein | A33Q_2930 | Not Available | Positive | 3033408 - 3034271 | 32439.2 |
| dihydrofolate reductase | A33Q_2931 | Not Available | Positive | 3034378 - 3034878 | 18880.9 |
| putative oxidoreductase/dehydrogenase | A33Q_2932 | Not Available | Positive | 3034875 - 3035660 | 28668.0 |
| hypothetical protein | A33Q_2933 | Not Available | Negative | 3035864 - 3036058 | 7413.86 |
| penicillin amidase family protein | A33Q_2934 | Not Available | Positive | 3036304 - 3038475 | 83243.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
