Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5,10-methylenetetrahydrofolate reductase | A33Q_2915 | Not Available | Negative | 3008983 - 3009936 | 35765.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | A33Q_2916 | Not Available | Negative | 3009939 - 3012623 | 100145.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | A33Q_2917 | Not Available | Negative | 3012643 - 3013686 | 37755.8 |
| rida | A33Q_2918 | Not Available | Positive | 3014027 - 3014584 | 19864.1 |
| hypothetical protein | A33Q_2919 | Not Available | Negative | 3014586 - 3015902 | 49504.0 |
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s) | A33Q_2920 | Not Available | Negative | 3015956 - 3020284 | 166342.0 |
| acylamino-acid-releasing enzyme | A33Q_2921 | Not Available | Positive | 3020400 - 3022565 | 80743.2 |
| acylamino-acid-releasing enzyme | A33Q_2922 | Not Available | Positive | 3022568 - 3025522 | 111192.0 |
| hypothetical protein | A33Q_2923 | Not Available | Positive | 3025719 - 3025847 | 4756.84 |
| rnd efflux system, outer membrane lipoprotein cmec | A33Q_2924 | Not Available | Negative | 3025922 - 3027376 | 54904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
