Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative co/zn/cd efflux system membrane fusion protein | A33Q_2905 | Not Available | Negative | 2999351 - 3000481 | 42123.5 |
| outer membrane efflux protein precursor | A33Q_2906 | Not Available | Negative | 3000513 - 3001871 | 50588.0 |
| putative tetr transcriptional regulator | A33Q_2907 | Not Available | Negative | 3001855 - 3002478 | 24701.8 |
| hydrolase, alpha/beta superfamily | A33Q_2908 | Not Available | Positive | 3002730 - 3003554 | 32147.3 |
| hypothetical protein | A33Q_2909 | Not Available | Positive | 3003582 - 3004124 | 21144.6 |
| carboxyl-terminal protease | A33Q_2910 | Not Available | Negative | 3004421 - 3005731 | 48774.2 |
| stress responsive alpha-beta barrel domain protein | A33Q_2911 | Not Available | Negative | 3005817 - 3006206 | 14723.7 |
| putative oxidoreductase protein | A33Q_2912 | Not Available | Positive | 3006279 - 3006485 | 7503.97 |
| tpr/glycosyl transferase domain protein | A33Q_2913 | Not Available | Positive | 3006601 - 3007914 | 50356.5 |
| pleiotropic regulatory protein | A33Q_2914 | Not Available | Positive | 3007895 - 3008986 | 40576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
