Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna synthetase | A33Q_2895 | Not Available | Negative | 2986069 - 2988129 | 77297.3 |
| transcriptional regulator (tetr family) protein | A33Q_2896 | Not Available | Negative | 2988277 - 2988909 | 24156.4 |
| dna ligase | A33Q_2897 | Not Available | Positive | 2989056 - 2991515 | 92831.1 |
| hypothetical protein | A33Q_2898 | Not Available | Positive | 2991515 - 2992015 | 19878.3 |
| dihydrodipicolinate synthase | A33Q_2899 | Not Available | Positive | 2992012 - 2992869 | 30598.2 |
| exodeoxyribonuclease vii large subunit | A33Q_2900 | Not Available | Positive | 2993004 - 2994254 | 47344.6 |
| hypothetical protein | A33Q_2901 | Not Available | Positive | 2994247 - 2994441 | 7170.37 |
| hypothetical protein | A33Q_2902 | Not Available | Positive | 2994579 - 2995280 | 26585.7 |
| transcriptional activator rfah | A33Q_2903 | Not Available | Negative | 2995285 - 2995761 | 18030.0 |
| rnd multidrug efflux transporter | A33Q_2904 | Not Available | Negative | 2995941 - 2999348 | 126449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
