Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | A33Q_0277 | Not Available | Positive | 280134 - 282404 | 84500.6 |
| transcriptional regulator, meci family | A33Q_0278 | Not Available | Positive | 282521 - 282898 | 14865.8 |
| regulatory sensor-transducer, blar1/mecr1 family | A33Q_0279 | Not Available | Positive | 282976 - 284496 | 58907.9 |
| hypothetical protein | A33Q_0280 | Not Available | Negative | 284534 - 285475 | 35523.9 |
| putative aspartate aminotransferase | A33Q_0281 | Not Available | Positive | 285868 - 287196 | 50515.5 |
| hypothetical protein | A33Q_0282 | Not Available | Positive | 287206 - 288084 | 32993.8 |
| hypothetical protein | A33Q_0283 | Not Available | Negative | 288287 - 288472 | 7123.55 |
| amidohydrolase family protein | A33Q_0284 | Not Available | Negative | 288537 - 290243 | 63032.1 |
| inosose dehydratase | A33Q_0285 | Not Available | Positive | 290242 - 290391 | 5722.88 |
| gcn5-related n-acetyltransferase | A33Q_0286 | Not Available | Negative | 290522 - 290803 | 10609.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
